Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883513.1_cds_XP_016438498.1_34152
CDS Infomation

[gene=LOC107764450] [db_xref=GeneID:107764450] [protein=protein SAND-like] [protein_id=XP_016438498.1] [location=join(39647..40144,46627..46706,46818..46889,46987..47026,47405..47506,47696..47817,49087..49219,49334..49425,50338..50419,50848..50912,51161..51463,51548..51639,52487..52551,53528..53619,53825..53879)] [gbkey=CDS]
Sequence

ATGCCTCCTAACTCTGACTCCTCCGATGATGATCAAAATCCTAACCCTAACCCTAAGCCT
AGCTCAATTGATCAGTCTTTGGACGTAATCGAGAATCAATTAGCTTCAATATCAATCGTC
CAACCTGAACCCGAATCGGATACCAATTCGGATACCAACGGAACGTCGCCGTCGAAGCTC
ACCAAGGGATCGTTGAACGAGAATTTTGATGGCGATAATGGAAATTTGAGACACGGCAAT
GTGATGGAGAAATCCAGCTCGTCCAAAATCGTGGGGAGGAACAATTCAGGGATGGAAGAA
ATGGAGGAACCTTCAAGTCCAAGTAGCAGTGGGTATGCTGGTGAGAGGGGAAGTAGCAAT
GCTAGTAGTAGTGGTAGGGGTGGTTCTGGAAATGGGGAAGTTGATGATGAGATTCATGAA
ATTGTGAATAATAATTCACTAGACGGAGTTTTAGATTCTGATGTACAATGGCTTCCTGGA
AAACGCCATGGCAGTGAGGATGATGCTTCCATTTCCTGGAGAAAAAGAAAGAAACACTTC
TTTATTTTGAGTCACTCAGGAAAACCAATATACTCAAGATATGGAGATGAACACAAGCTC
GCTGGATTCTCTGCCACTTTGCAAGCCATCATATCATTTGTGGAGAATGGGGGTGATCGA
GTCAACCTGATCAGAGCTGGAAAGCACCAGGTAGTATTTCTTGTGAAGGGACCTATTTAC
TTGGTTTGCATAAGCTGTACAGAAGAGCCTTACATGTCACTAAGGGGGCAACTAGAGCTC
CTATATAATCAGATGATACTTATCCTTACAAGGTCTGTAAATAGATGTTTTGAGAAGAAT
GCAAAGTTTGATATGACACCTCTGCTTGGAGGAACAGATGTCGTCTTCTCTTCTCTGATC
CATTCTTTCAGTTGGAATCCAGCCACTTTTCTCCATGCATACACATGCCTACCACTTGCT
TATGCAACAAGGCAATCTGCTGGGGCTATCTTGCAGGATGTAGCTGATTCAGGCGTCTTG
TTTGCTATATTAATGTGTAAACACAAGGTTATCAGTCTCGTTGGTGCCCAAAAAGCCTCT
CTTCACCCTGATGATATGCTATTGCTATCCAATTTTGTTATGTCTTCTGAATCATTTAGG
ACATCAGAATCCTTCTCACCTATTTGTCTACCAAGATTCAATCCCATGGCATTTTTATAT
GCTTATGTGCATTACCTTGATGGTGACACATACTTAATATTGCTGACTACAAGTTCAGAT
GCCTTTTATCATCTTAAAGATTGCAGGATTCGTGTTGAAAATGTACTTTTGAAGTCCAAT
GTGCTCGGTGAAGTTCAAAGATCCATGGTAGATGGTGGCATGCGCATTGAAGATTTACCT
GATGACCGTTGTTCCCGTTCTGGAGCAGTCTCCCCTCATTTGGGTCAGCATGGACATGCA
ATGGATTCATCAGAGAGATTCGACGAAGCATTCCTAGGTGTTGGTGGCCCTGCTGGACTT
TGGCATTTTATATATCGAAGTATTTATCTTGACCAGTACGTCTCATCAGAGTTTTCCTCA
CCAATAAACAGCAGACGACAGCAAAAAAGGTTATATAGATCTTACCAGAAGATCTATTCA
TCGATGCATGAAGAAGGAATTGGGCCTCACAAAACTCAGTTTAAAAGGGATGATAATTGT
GTTCTCTTGTGCTGGGTTACCCCGGATTTCGAACTTTATGCTGTATTTGATCCTCTGGCA
GACAAGGCTCTTGCAATTAAAACTTGCAATAGGGTATGTCAGTGGATGAAGGATGTAGAA
AATGAAATTTTCTTGTTGGGAGCGAGCCCTTTTTCATGGTGGAGTGTTCCAGGCAATACT
CCATTGCCGGAGTTTGCAGAGATATCCTTATGA

Peptide Sequence

PEP ID

XP_016438498.1
PEP Infomation

PREDICTED: protein SAND-like [Nicotiana tabacum]
Sequence

MPPNSDSSDDDQNPNPNPKPSSIDQSLDVIENQLASISIVQPEPESDTNSDTNGTSPSKL
TKGSLNENFDGDNGNLRHGNVMEKSSSSKIVGRNNSGMEEMEEPSSPSSSGYAGERGSSN
ASSSGRGGSGNGEVDDEIHEIVNNNSLDGVLDSDVQWLPGKRHGSEDDASISWRKRKKHF
FILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVNLIRAGKHQVVFLVKGPIY
LVCISCTEEPYMSLRGQLELLYNQMILILTRSVNRCFEKNAKFDMTPLLGGTDVVFSSLI
HSFSWNPATFLHAYTCLPLAYATRQSAGAILQDVADSGVLFAILMCKHKVISLVGAQKAS
LHPDDMLLLSNFVMSSESFRTSESFSPICLPRFNPMAFLYAYVHYLDGDTYLILLTTSSD
AFYHLKDCRIRVENVLLKSNVLGEVQRSMVDGGMRIEDLPDDRCSRSGAVSPHLGQHGHA
MDSSERFDEAFLGVGGPAGLWHFIYRSIYLDQYVSSEFSSPINSRRQQKRLYRSYQKIYS
SMHEEGIGPHKTQFKRDDNCVLLCWVTPDFELYAVFDPLADKALAIKTCNRVCQWMKDVE
NEIFLLGASPFSWWSVPGNTPLPEFAEISL

Transcript Sequence

Gene sequence data has not been registered.